The detailed information of tRNA gene sequence


Sequence ID>WENV170975622
Genome IDMTKZ01001571
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 28881
End posion on genome 28956
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acgtgcttac
tRNA gene sequence 
GCCCTCATCGTCTAGTGGCCTAGGACACTGGCCTTTCACGCCGGCGACCGGGGTTCAAAT
CCCCGTGAGGGCGCCA
Downstream region at tRNA end position 
gaggtggaag
Secondary structure (Cloverleaf model)
>WENV170975622	Glu	TTC
                   c      GCCA gaggtggaag
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     G C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CGAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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