The detailed information of tRNA gene sequence


Sequence ID>WENV170975656
Genome IDMTKZ01001738
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15123
End posion on genome 15200
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccttggccgt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCCGGTTAGCGCGCCTGGTTCGGGACCAGGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ttcccttcct
Secondary structure (Cloverleaf model)
>WENV170975656	Pro	CGG
                   t      ACCA ttcccttcct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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