The detailed information of tRNA gene sequence


Sequence ID>WENV170975669
Genome IDMTKZ01001775
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 7792
End posion on genome 7868
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttctgcatat
tRNA gene sequence 
GGAGTGGTAGCTCAATTGGTTAGAGCATCGCACTGTCACTGCGAAGGTTGCGGGTTCGAC
CCCCGTCCATTCCGCCA
Downstream region at tRNA end position 
ttttcaacat
Secondary structure (Cloverleaf model)
>WENV170975669	Asp	GTC
                   t      GCCA ttttcaacat
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          C C
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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