The detailed information of tRNA gene sequence


Sequence ID>WENV170975671
Genome IDMTKZ01001776
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 25343
End posion on genome 25434
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gttataaaag
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGAATGCGGCGGTCTCGAAAACCGTTGTCCTACGTAAGAGG
GACCGGGGGTTCGAATCCCCCCCTCTCCGCAA
Downstream region at tRNA end position 
ttttttcaac
Secondary structure (Cloverleaf model)
>WENV170975671	Ser	CGA
                   g      GCAA ttttttcaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCTACGTAAGAGGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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