The detailed information of tRNA gene sequence


Sequence ID>WENV170975683
Genome IDMTKZ01001832
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 43561
End posion on genome 43486
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttctatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAGT
CCTCCCTCCGCTACAA
Downstream region at tRNA end position 
agaaagaggg
Secondary structure (Cloverleaf model)
>WENV170975683	Met	CAT
                   t      ACAA agaaagaggg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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