The detailed information of tRNA gene sequence


Sequence ID>WENV170975685
Genome IDMTKZ01001836
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4464
End posion on genome 4377
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcaggaacaa
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGTTTAAGGCGCCTGTCTTGAAAACAGGTTTGGTGAAAGCCAAC
GTGGGTTCGAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
gttacttttc
Secondary structure (Cloverleaf model)
>WENV170975685	Ser	TGA
                   a      GCCA gttacttttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      |   | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTTGGTGAAAGCCAAC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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