The detailed information of tRNA gene sequence


Sequence ID>WENV170975686
Genome IDMTKZ01001836
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4345
End posion on genome 4253
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgcatacac
tRNA gene sequence 
GGGGAGGTGCCGGAGTGGCTGAACGGGATCGCCTGCTAAGTGATTGTCGGGCTTTAAACT
CGACCGGGGGTTCGAATCCCCCCCTCCCCGCCA
Downstream region at tRNA end position 
tttttacaca
Secondary structure (Cloverleaf model)
>WENV170975686	Ser	GCT
                   c      GCCA tttttacaca
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    C       A C G G
      T G A        G     TGTCGGGCTTTAAACTCGACC
                    A - T
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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