The detailed information of tRNA gene sequence


Sequence ID>WENV170975694
Genome IDMTKZ01001901
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4198
End posion on genome 4121
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaacgaggt
tRNA gene sequence 
GGGGGCGTAGTTCAGTTTGGTTAGAACGTCTGCCTGTCACGCAGAAGGTCGCGAGTTCGA
GTCTCGTCGCTCCCGCCA
Downstream region at tRNA end position 
ttttcaagag
Secondary structure (Cloverleaf model)
>WENV170975694	Asp	GTC
                   t      GCCA ttttcaagag
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C T C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G A G     C
  G         | | | |                 T T
  G         G A A C
    T T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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