The detailed information of tRNA gene sequence


Sequence ID>WENV170975718
Genome IDMTKZ01002022
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 17014
End posion on genome 17089
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ggacgcaatT
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGTAGCGCACCGGTATGGGGTGCCGGTGGTCGCAGGTTCGAA
TCCTGTCGCCCCGAAtt
Downstream region at tRNA end position 
cttctttnnn
Secondary structure (Cloverleaf model)
>WENV170975718	Pro	GGG
                   T      AAtt cttctttnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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