The detailed information of tRNA gene sequence


Sequence ID>WENV170975722
Genome IDMTKZ01002058
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1113
End posion on genome 1187
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcacccacat
tRNA gene sequence 
TGCGGGGTGGAGCAGTGGCAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAATC
CTCCCTCCGCTACAA
Downstream region at tRNA end position 
agaaaaagcc
Secondary structure (Cloverleaf model)
>WENV170975722	Met	CAT
                   t      ACAA agaaaaagcc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C C T C C     A
        G A        G      | | | | |     G
      T     C G A G       G G A G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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