The detailed information of tRNA gene sequence


Sequence ID>WENV170975728
Genome IDMTKZ01002092
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6388
End posion on genome 6313
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgggccttaT
tRNA gene sequence 
GGACAATTAGCTCAGCTGGTTAGAGCACTACATTCACATTGTAGGGGTCATTGGTTCAAA
TCCAATATTGTCCAAtt
Downstream region at tRNA end position 
acttcacact
Secondary structure (Cloverleaf model)
>WENV170975728	Val	CAC
                   T      AAtt acttcacact
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     T - A          T A
                    T     T A A C C     A
      C G A        A      | | | | |     A
    T       C T C G       A T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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