The detailed information of tRNA gene sequence


Sequence ID>WENV170975752
Genome IDMTKZ01002204
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6581
End posion on genome 6494
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agtgacgcac
tRNA gene sequence 
GGAGGGATGGCAGAGCGGACGAATGCGACGGTCTTGAAAACCGTTGAGGTGCAAGCCTCC
GGGGGTTCGAATCCCCCTCCCTCCGCCA
Downstream region at tRNA end position 
ctcaacctcc
Secondary structure (Cloverleaf model)
>WENV170975752	Ser	TGA
                   c      GCCA ctcaacctcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    A       A T G C
      C G A        G     TGAGGTGCAAGCCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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