The detailed information of tRNA gene sequence


Sequence ID>WENV170975766
Genome IDMTKZ01002273
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2415
End posion on genome 2340
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cttctttgtt
tRNA gene sequence 
CGGGGCGTGGCGCAGCCCGGCTAGCGCGCTTGCATGGGGTGCAAGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACtt
Downstream region at tRNA end position 
ttgacccctc
Secondary structure (Cloverleaf model)
>WENV170975766	Pro	GGG
                   t      ACtt ttgacccctc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C C G A        G      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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