The detailed information of tRNA gene sequence


Sequence ID>WENV170975781
Genome IDMTKZ01002399
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 917
End posion on genome 832
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaatatagag
tRNA gene sequence 
GGAGGATTAGTCCTAATTGGTAAGGCAGCGGTCTTGAAAACCGCCGGGTTATGCCCTTGG
GGGTTCGAATCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
gaaaaataag
Secondary structure (Cloverleaf model)
>WENV170975781	Ser	TGA
                   g      GCCA gaaaaataag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    T         | + |                 T T
    G       A G G C
      G T A        A     CGGGTTATGCCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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