The detailed information of tRNA gene sequence


Sequence ID>WENV170975786
Genome IDMTKZ01002407
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9897
End posion on genome 9974
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccctatccgc
tRNA gene sequence 
GCTCCGGTAGTGTAGCTCGGCCAATCATGAAGGACTCTCACTCCTTCGACTTGGGTTCAA
ATCCCAACCGGAGCATCA
Downstream region at tRNA end position 
ttttttgaaa
Secondary structure (Cloverleaf model)
>WENV170975786	Glu	CTC
                   c      ATCA ttttttgaaa
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A A C C C     A
    T C G A        A      | | | | |     A
  C         T G T G       T T G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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