The detailed information of tRNA gene sequence


Sequence ID>WENV170975792
Genome IDMTKZ01002453
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11822
End posion on genome 11896
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcaatcattt
tRNA gene sequence 
GGGGTATTAGCTCAGTTGGCTAGAGCACCAGTATCGCACACTGGAGGTCATCGGTTCAAA
TCCGATATACTCCACtc
Downstream region at tRNA end position 
atattatggt
Secondary structure (Cloverleaf model)
>WENV170975792	Ala	CGC
                   t      ACtc atattatggt
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     T - A          T A
                    T     T A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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