The detailed information of tRNA gene sequence


Sequence ID>WENV170975802
Genome IDMTKZ01002471
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3102
End posion on genome 3013
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccgtggcgc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTGAAGGCGGCGGTCTTGAAAACCGCTTTCCGGTCCTCCGGA
ACGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
ccgtcgttct
Secondary structure (Cloverleaf model)
>WENV170975802	Ser	TGA
                   c      GCCA ccgtcgttct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TTTCCGGTCCTCCGGAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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