The detailed information of tRNA gene sequence


Sequence ID>WENV170975803
Genome IDMTKZ01002471
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2159
End posion on genome 2066
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccccgaccgc
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGTCGATCAGGAACGCCTGCTAAGCGTTTGCCCTGGCTCAAACC
GGGGCCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ttctctcctt
Secondary structure (Cloverleaf model)
>WENV170975803	Ser	GCT
                   c      GCCA ttctctcctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G C G G G     C
    G       + | | |                 T T
    T       T C A G
      C G A        G     TGCCCTGGCTCAAACCGGGGCC
                    A - T
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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