The detailed information of tRNA gene sequence


Sequence ID>WENV170975816
Genome IDMTKZ01002503
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 21712
End posion on genome 21636
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cagactgcca
tRNA gene sequence 
CGGGATGTGGCGCAGCTTGGTAGCGCATCCGCTTTGGGAGCGGAGGGTCGCAGGTTCAAA
TCCTGTCATCCCGACAA
Downstream region at tRNA end position 
caacgagtca
Secondary structure (Cloverleaf model)
>WENV170975816	Pro	TGG
                   a      ACAA caacgagtca
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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