The detailed information of tRNA gene sequence


Sequence ID>WENV170975821
Genome IDMTKZ01002569
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 89335
End posion on genome 89259
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttctttatat
tRNA gene sequence 
GGGGGTTTAGCTCAGTTGGCTAGAGCGTTTGACTGGCAGTCAAAAGGTCAGGGGTTCGAT
TCCCCTAATCTCCACCT
Downstream region at tRNA end position 
ccgccctccg
Secondary structure (Cloverleaf model)
>WENV170975821	Ala	GGC
                   t      ACCT ccgccctccg
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     T - A          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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