The detailed information of tRNA gene sequence


Sequence ID>WENV170975832
Genome IDMTKZ01002584
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15871
End posion on genome 15782
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
catcacggac
tRNA gene sequence 
GGAGAGTTGCCAGAGCGGACGAATGGGACGGTCTCGAAAACCGTTGAATGCGCAAGCATT
CCAAGGGTTCGAATCCCTTACTCTCCGCCA
Downstream region at tRNA end position 
ctacatccat
Secondary structure (Cloverleaf model)
>WENV170975832	Ser	CGA
                   c      GCCA ctacatccat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G A C C       A A G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGAATGCGCAAGCATTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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