The detailed information of tRNA gene sequence


Sequence ID>WENV170975850
Genome IDMTKZ01002654
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8129
End posion on genome 8041
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttcatccgct
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTTGATCGGGGCGGTCTCGAAAACCGTTATGGCTCTCGTGGTC
ATCGTGGGTTCGAACCCCACCCTCTCCGCtc
Downstream region at tRNA end position 
actttgttcg
Secondary structure (Cloverleaf model)
>WENV170975850	Ser	CGA
                   t      GCtc actttgttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          C A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TATGGCTCTCGTGGTCATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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