The detailed information of tRNA gene sequence


Sequence ID>WENV170975852
Genome IDMTKZ01002719
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9838
End posion on genome 9762
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccattaccg
tRNA gene sequence 
GGCGGTGTAGCTCAGCCGGTTAGAGCATACGGCTCATATCCGTAGTGTCCGGGGTTCGAT
TCCCTGCACCGCCACCA
Downstream region at tRNA end position 
tttgaatcgc
Secondary structure (Cloverleaf model)
>WENV170975852	Met	CAT
                   g      ACCA tttgaatcgc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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