The detailed information of tRNA gene sequence


Sequence ID>WENV170975859
Genome IDMTKZ01002793
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9885
End posion on genome 9809
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgccgttat
tRNA gene sequence 
CGCGGGGTAGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTCAAA
TCCAACCCCCGCTACCA
Downstream region at tRNA end position 
accgatccca
Secondary structure (Cloverleaf model)
>WENV170975859	Met	CAT
                   t      ACCA accgatccca
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
      C G A        A      | | | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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