The detailed information of tRNA gene sequence


Sequence ID>WENV170975860
Genome IDMTKZ01002798
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 43711
End posion on genome 43786
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cagcgcgtgt
tRNA gene sequence 
GGGGCAGTAGCTCAGTTGGGAGAGCACCACGTTCGCAACGTGGGGGTCGAGGGTTCGAAT
CCCTTCTGCTCCACCA
Downstream region at tRNA end position 
tttcttctgc
Secondary structure (Cloverleaf model)
>WENV170975860	Ala	CGC
                   t      ACCA tttcttctgc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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