The detailed information of tRNA gene sequence


Sequence ID>WENV170975866
Genome IDMTKZ01002879
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 96911
End posion on genome 97004
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaacgcacag
tRNA gene sequence 
GGTGGGATGGCCGAGCGGCTGAAGGCACTCGCCTGCTAAGCGAGTAGGGGGGCTTAAACC
TCTCTCCAGGGTTCGAATCCCTGTCCCACCGCCA
Downstream region at tRNA end position 
tagggcccca
Secondary structure (Cloverleaf model)
>WENV170975866	Ser	GCT
                   g      GCCA tagggcccca
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TAGGGGGGCTTAAACCTCTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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