The detailed information of tRNA gene sequence


Sequence ID>WENV170975872
Genome IDMTKZ01002886
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 30260
End posion on genome 30172
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tctgcttcgC
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTTTAAGGAGGCAGTCTCGAAAACTGTTGTGCGCGCAAGCGTA
CCGCGAGTTCGAATCTCGCCCTCTCCGGtc
Downstream region at tRNA end position 
cttttcacgc
Secondary structure (Cloverleaf model)
>WENV170975872	Ser	CGA
                   C      GGtc cttttcacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     G
    G       G C C T       G C G A G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGTGCGCGCAAGCGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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