The detailed information of tRNA gene sequence


Sequence ID>WENV170975874
Genome IDMTKZ01002897
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 13472
End posion on genome 13548
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttcatctgt
tRNA gene sequence 
CGGGGAATAGTTCAGATGGCTAGAACGCTGCGTTTGGGACGCAGAGGTCGCAGGTTCAAG
TCCTGTTTCCCCGACCA
Downstream region at tRNA end position 
tgttgttatt
Secondary structure (Cloverleaf model)
>WENV170975874	Pro	TGG
                   t      ACCA tgttgttatt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     T G T C C     A
      A G A        A      + | | | |     A
    T       C T T G       G C A G G     C
    G       | | | |                 T T
    G       G A A C
      C T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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