The detailed information of tRNA gene sequence


Sequence ID>WENV170975876
Genome IDMTKZ01002918
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15219
End posion on genome 15305
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cctcccgagc
tRNA gene sequence 
GCGGAAGTGGCGGAATTGGCAGACGCGTAAGCCTCAGGAGCTTATAGCCGCAAGGCTGTG
GGGGTTCAAGTCCCCCCTTCCGCACCA
Downstream region at tRNA end position 
tgtcccgaat
Secondary structure (Cloverleaf model)
>WENV170975876	Leu	CAG
                   c      ACCA tgtcccgaat
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TAGCCGCAAGGCTGT
                    T - A
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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