The detailed information of tRNA gene sequence


Sequence ID>WENV170975902
Genome IDMTKZ01003106
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 27336
End posion on genome 27411
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccggcgtcct
tRNA gene sequence 
GCCCCCATCGTCTAGCGGCCTAGGACACCACCCTCTCAAGGTGGCGGCACGGGTTCGAAT
CCCGTTGGGGGTGCAA
Downstream region at tRNA end position 
cagagaaacc
Secondary structure (Cloverleaf model)
>WENV170975902	Glu	CTC
                   t      GCAA cagagaaacc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CGGC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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