The detailed information of tRNA gene sequence


Sequence ID>WENV170975921
Genome IDMTKZ01003218
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 17634
End posion on genome 17547
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttattatttt
tRNA gene sequence 
GCCGGAGTGGTGGAATAGGTAGACACAAGGGACTTAAAATCCCTCGAGCCCAAAGCTCGT
GCCGGTTCAAGTCCGGCCTCTGGTACCA
Downstream region at tRNA end position 
agcgggaata
Secondary structure (Cloverleaf model)
>WENV170975921	Leu	TAA
                   t      ACCA agcgggaata
                     G + T
                     C - G
                     C - G
                     G + T
                     G - C
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    A       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGAGCCCAAAGCTCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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