The detailed information of tRNA gene sequence


Sequence ID>WENV170975938
Genome IDMTKZ01003320
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11357
End posion on genome 11266
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaggacggag
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGGCGGTCTCGAAAACCGTTGTCCCGCTTCCGCGG
GATCGGGGGTTCGAATCCCCCTCTCTCCGCAA
Downstream region at tRNA end position 
cgacaatgac
Secondary structure (Cloverleaf model)
>WENV170975938	Ser	CGA
                   g      GCAA cgacaatgac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCCGCTTCCGCGGGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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