The detailed information of tRNA gene sequence


Sequence ID>WENV170975942
Genome IDMTKZ01003330
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6165
End posion on genome 6238
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cttgttaatt
tRNA gene sequence 
GCCGAAGTAGCTCAGTTGGTCAGAGCAACTGTTTTGTAAACAGTAGGTCGAGAGTTCGAA
TCTCTCCTTCGGCTtag
Downstream region at tRNA end position 
tgcagaggtt
Secondary structure (Cloverleaf model)
>WENV170975942	Thr	TGT
                   t      Ttag tgcagaggtt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     G
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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