The detailed information of tRNA gene sequence


Sequence ID>WENV170975946
Genome IDMTKZ01003358
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9939
End posion on genome 10026
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctctgcttgt
tRNA gene sequence 
GGAGAGGTCGCATAGCTGGCCTAGTGCGCTCGCTTGGAAAGCGAGTATACCGATGAGGTA
TCGCGGGTTCGAATCCCGCCCTCTCCGCtc
Downstream region at tRNA end position 
tttttgttta
Secondary structure (Cloverleaf model)
>WENV170975946	Ser	GGA
                   t      GCtc tttttgttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T C G A        C      | | | | |     G
  G         T A C G       G C G G G     C
  G         + | | |                 T T
  C         G T G C
    C T A          G     TATACCGATGAGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK