The detailed information of tRNA gene sequence


Sequence ID>WENV170975961
Genome IDMTKZ01003455
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10326
End posion on genome 10240
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacaaaaagg
tRNA gene sequence 
GGAGAGATGCCTGAGTGGTCGAAAGGAAACGCTTGGAGAGCGTTCGTATGAGAAATCATA
CCGTGGGTTCGAATCCCACTCTCTCCGttg
Downstream region at tRNA end position 
gcaattcaaa
Secondary structure (Cloverleaf model)
>WENV170975961	Ser	GGA
                   g      Gttg gcaattcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    T       A A G G
      C G A        A     CGTATGAGAAATCATACC
                    A - T
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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