The detailed information of tRNA gene sequence


Sequence ID>WENV170975972
Genome IDMTKZ01003565
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2443
End posion on genome 2534
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctctgtataT
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGTCGAAAGGAACTCACTGCTAACGAGTCGTAGGCCTTTAAAGC
CTACCGCGGGTTCGAATCCCGCCCTCTCCGTat
Downstream region at tRNA end position 
ctactacttc
Secondary structure (Cloverleaf model)
>WENV170975972	Ser	GCT
                   T      GTat ctactacttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G C G G G     C
    G         | | |                 T T
    T       A A G G
      C G A        A     CGTAGGCCTTTAAAGCCTACC
                    A - T
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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