The detailed information of tRNA gene sequence


Sequence ID>WENV170975987
Genome IDMTKZ01003692
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2875
End posion on genome 2963
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggaaactgcC
tRNA gene sequence 
GGAGAGCTGTCCGAGTGGCTTAAGGAGCGGTCTTGGAAAGGCCGTGTAGGGCTTGCCCTA
CCGTGGGTTCGAATCCCACGCTCTCCGTtt
Downstream region at tRNA end position 
ttgtcttttt
Secondary structure (Cloverleaf model)
>WENV170975987	Ser	GGA
                   C      GTtt ttgtcttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGTAGGGCTTGCCCTACC
                    C - G
                    G - C
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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