The detailed information of tRNA gene sequence


Sequence ID>WENV170975997
Genome IDMTKZ01003712
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3966
End posion on genome 4039
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgatgcatgc
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTCACACGGCGGAGGTCAGGAGTTCGAA
TCTCCTCGAGCCCAttc
Downstream region at tRNA end position 
aggtatattc
Secondary structure (Cloverleaf model)
>WENV170975997	Val	CAC
                   c      Attc aggtatattc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C C T C     A
      C G A        G      | | | | |     G
    T       T C T G       A G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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