The detailed information of tRNA gene sequence


Sequence ID>WENV170975998
Genome IDMTKZ01003721
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 412
End posion on genome 334
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
catcgctttT
tRNA gene sequence 
GGTGCGGTAGTTCAGTTTGGTTAGAATATCGGCCTGTCACGCCGAGGGTCGCGGGTTCGA
GTCCCGTCCGCACCGCCC
Downstream region at tRNA end position 
ctacaccctc
Secondary structure (Cloverleaf model)
>WENV170975998	Asp	GTC
                   T      GCCC ctacaccctc
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G G G     C
  G         | | | +                 T T
  G         G A A T
    T T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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