The detailed information of tRNA gene sequence


Sequence ID>WENV170976010
Genome IDMTKZ01003817
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 7845
End posion on genome 7760
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acatcatgat
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCGATGGCGGCGGTCTTGAAAACCGTTGGACGAAAGTCTCGC
GGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
gcatcattgc
Secondary structure (Cloverleaf model)
>WENV170976010	Ser	TGA
                   t      GCCA gcatcattgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G C G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        G     TGGACGAAAGTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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