The detailed information of tRNA gene sequence


Sequence ID>WENV170976027
Genome IDMTKZ01003906
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6522
End posion on genome 6445
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttaactgcaT
tRNA gene sequence 
CGGGGCGTGGCGCAGCATGGTTTAGCGCGCTTGCCTTGGGAGCAAGAGGTCGCTGGTTCA
AATCCAGTCGCCCCGATtt
Downstream region at tRNA end position 
taaatcgaat
Secondary structure (Cloverleaf model)
>WENV170976027	Pro	TGG
                   T      ATtt taaatcgaat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
    A C G A        G      + | | | |     A
  T         C G C G       G C T G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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