The detailed information of tRNA gene sequence


Sequence ID>WENV170976040
Genome IDMTKZ01004001
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 452
End posion on genome 363
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaccctcac
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGAAGGAGCACGCTTGGAAAGCGTGTGTAGGGGTAACTCTA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tttcatcttg
Secondary structure (Cloverleaf model)
>WENV170976040	Ser	GGA
                   c      GCCA tttcatcttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGTAGGGGTAACTCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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