The detailed information of tRNA gene sequence


Sequence ID>WENV170976049
Genome IDMTKZ01004050
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 13238
End posion on genome 13162
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagcggccag
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGCTAGAGCCACCGGCTCATAACCGGTCGGTCCCTGGTTCGAG
TCCAGGTGGGCCCACCA
Downstream region at tRNA end position 
gagtttcaac
Secondary structure (Cloverleaf model)
>WENV170976049	Met	CAT
                   g      ACCA gagtttcaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        C     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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