The detailed information of tRNA gene sequence


Sequence ID>WENV170976050
Genome IDMTKZ01004050
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 13147
End posion on genome 13071
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttcaacgcga
tRNA gene sequence 
GGGCGGGTAGCTCAGTTGGTTAGAGCACAAGCTTCACACGTTTGGGGTCGCAGGTTCGAC
TCCTGTCCCGCCCACCA
Downstream region at tRNA end position 
gccatgtccg
Secondary structure (Cloverleaf model)
>WENV170976050	Val	CAC
                   a      ACCA gccatgtccg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T C
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    A - T
                    G + T
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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