The detailed information of tRNA gene sequence


Sequence ID>WENV170976083
Genome IDMTKZ01004419
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3506
End posion on genome 3579
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agagtacctt
tRNA gene sequence 
GGGGATGTAGCTTAGTCGGGAGAGCGCCTCCTTTGCAAGGAGGAGGTCAGGGGTTCGAGT
CCCCTCATCTCCACtg
Downstream region at tRNA end position 
caaaagcaac
Secondary structure (Cloverleaf model)
>WENV170976083	Ala	TGC
                   t      ACtg caaaagcaac
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    C       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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