The detailed information of tRNA gene sequence


Sequence ID>WENV170976086
Genome IDMTKZ01004432
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 29039
End posion on genome 28965
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttaaaatct
tRNA gene sequence 
GGCAGGGTAGCTCAGTTGGTTAGAGCACGGCATTCATAACGCCGGGGTCGCGGGTTCAAG
TCCCGCCTCTGCTACtg
Downstream region at tRNA end position 
taaaataatc
Secondary structure (Cloverleaf model)
>WENV170976086	Met	CAT
                   t      ACtg taaaataatc
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     G + T
                     G - C          T G
                    T     C G C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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