The detailed information of tRNA gene sequence


Sequence ID>WENV170976087
Genome IDMTKZ01004445
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15462
End posion on genome 15386
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataactcttt
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTCAGAGCAGGTGACTCATAATCACTTGGTCGCTGGTTCGAT
TCCAGCAGGGCCCACCA
Downstream region at tRNA end position 
ttctttttcc
Secondary structure (Cloverleaf model)
>WENV170976087	Met	CAT
                   t      ACCA ttctttttcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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