The detailed information of tRNA gene sequence


Sequence ID>WENV170976097
Genome IDMTKZ01004548
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 23876
End posion on genome 23786
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatggattc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCTAAGGCGCACGCCTGGAAAGTGTGTGTACGCCGAAAGCGT
ACCAAGGGTTCGAATCCCTTTCTCTCCGCAA
Downstream region at tRNA end position 
aaattaactt
Secondary structure (Cloverleaf model)
>WENV170976097	Ser	GGA
                   c      GCAA aaattaactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGTACGCCGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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