The detailed information of tRNA gene sequence


Sequence ID>WENV170976102
Genome IDMTKZ01004568
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 19097
End posion on genome 19021
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaaaaatt
tRNA gene sequence 
GCGCCCATAGCTCAGTTGGTTAGAGCAACTGACTCATAATCAGTAGGCCCCTGGTTCAAG
TCCAGGTGGGCGCACAA
Downstream region at tRNA end position 
tccagcgatt
Secondary structure (Cloverleaf model)
>WENV170976102	Met	CAT
                   t      ACAA tccagcgatt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGCC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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