The detailed information of tRNA gene sequence


Sequence ID>WENV170976107
Genome IDMTKZ01004585
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6980
End posion on genome 7055
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaattgataa
tRNA gene sequence 
CGCGAGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCGAAT
CCTTCCCTCGCTACCA
Downstream region at tRNA end position 
atttttatag
Secondary structure (Cloverleaf model)
>WENV170976107	Met	CAT
                   a      ACCA atttttatag
                     C   T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        G      | | | | |     G
    T       C G A G       G A A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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